Merge branch 'PBI-12-statistics' into 'staging'

Implement case counts views for statistics

See merge request !52

apps/cases/tests/factories/cases.py

@@ -24,6 +24,7 @@ class InvestigationCaseFactory(factory.DjangoModelFactory):
     author = factory.SubFactory(AccountFactory)
     case_subject = factory.SubFactory(CaseSubjectFactory)
     author = factory.SubFactory(AccountFactory)
+    is_positive = None
 
 
 class MonitoringCaseFactory(factory.DjangoModelFactory):

apps/exportables/apps.py

+from django.apps import AppConfig
+
+
+class ExportablesConfig(AppConfig):
+    name = 'exportables'

apps/exportables/constants.py

+# District
+
+DISTRICTS = (
+    "Beji",
+    "Bojongsari",
+    "Cilodong",
+    "Cimanggis",
+    "Cinere",
+    "Cipayung",
+    "Limo",
+    "Pancoran Mas",
+    "Sawangan",
+    "Sukmajaya",
+    "Tapos",
+)
+DISTRICT = "district"
+
+# Age
+
+AGE = "age"
+
+# Sex
+
+SEX = "sex"
+FEMALE = "female"
+MALE = "male"
+
+# Outcome
+
+POSITIVE = "positive"
+NEGATIVE = "negative"
+UNDETERMINED = "undetermined"
+
+# Total
+
+TOTAL = "total_count"

apps/exportables/tests/test_units/test_exportables.py

+import json
+from rest_framework import status
+from rest_framework.test import APITestCase
+
+from apps.cases.models import CaseSubject
+from apps.cases.tests.factories.case_subjects import CaseSubjectFactory
+from apps.cases.tests.factories.cases import InvestigationCaseFactory
+
+
+class ExportableViewTest(APITestCase):
+    @classmethod
+    def setUpTestData(cls):
+        InvestigationCaseFactory(
+            case_subject=CaseSubjectFactory(
+                district="Beji",
+                age=19,
+                is_male=True,
+            ),
+            is_positive=True,
+        )
+        InvestigationCaseFactory(
+            case_subject=CaseSubjectFactory(
+                district="Cilodong",
+                age=20,
+                is_male=False,
+            ),
+            is_positive=True,
+        )
+        InvestigationCaseFactory(
+            case_subject=CaseSubjectFactory(
+                district="Tapos",
+                age=21,
+                is_male=True,
+            ),
+            is_positive=False,
+        )
+        InvestigationCaseFactory(
+            case_subject=CaseSubjectFactory(
+                district="Unknown",
+                age=21,
+                is_male=False,
+            ),
+            is_positive=False,
+        )
+        InvestigationCaseFactory(
+            case_subject=CaseSubjectFactory(
+                district="Sawangan",
+                age=22,
+                is_male=True,
+            ),
+            is_positive=None,
+        )
+
+    def test_exportable_data_return_values(self):
+        url = "/exportables/"
+        response = self.client.get(url)
+
+        self.assertEqual(response.status_code, status.HTTP_200_OK)
+
+        data = {
+            "age": {
+                "19": {
+                    "positive": 1,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 1
+                },
+                "20": {
+                    "positive": 1,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 1
+                },
+                "21": {
+                    "positive": 0,
+                    "negative": 2,
+                    "undetermined": 0,
+                    "total_count": 2
+                },
+                "22": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 1,
+                    "total_count": 1
+                }
+            },
+            "district": {
+                "Beji": {
+                    "positive": 1,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 1
+                },
+                "Bojongsari": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Cilodong": {
+                    "positive": 1,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 1
+                },
+                "Cimanggis": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Cinere": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Cipayung": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Limo": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Pancoran Mas": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Sawangan": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 1,
+                    "total_count": 1
+                },
+                "Sukmajaya": {
+                    "positive": 0,
+                    "negative": 0,
+                    "undetermined": 0,
+                    "total_count": 0
+                },
+                "Tapos": {
+                    "positive": 0,
+                    "negative": 1,
+                    "undetermined": 0,
+                    "total_count": 1
+                },
+                "Unknown": {
+                    "positive": 0,
+                    "negative": 1,
+                    "undetermined": 0,
+                    "total_count": 1
+                }
+            },
+            "sex": {
+                "male": {
+                    "positive": 1,
+                    "negative": 1,
+                    "undetermined": 1,
+                    "total_count": 3
+                },
+                "female": {
+                    "positive": 1,
+                    "negative": 1,
+                    "undetermined": 0,
+                    "total_count": 2
+                }
+            },
+            "total_count": 5
+        }
+
+        self.assertJSONEqual(response.content, data)

apps/exportables/urls.py

+from django.urls import path
+
+from apps.exportables.views import CaseCountsView
+
+
+urlpatterns = [
+    path("", CaseCountsView.as_view()),
+]

apps/exportables/utils.py

+from apps.exportables.constants import (
+    DISTRICT,
+    DISTRICTS,
+    FEMALE,
+    MALE,
+    NEGATIVE,
+    POSITIVE,
+    TOTAL,
+    UNDETERMINED
+)
+
+
+def generate_initial_counts():
+    return {
+        POSITIVE: 0,
+        NEGATIVE: 0,
+        UNDETERMINED: 0,
+        TOTAL: 0
+    }
+
+
+def generate_initial_group_counts():
+    age_groups = {}
+    sex_groups = {
+        MALE: generate_initial_counts(),
+        FEMALE: generate_initial_counts(),
+    }
+    district_groups = {
+        district: generate_initial_counts() for district in DISTRICTS
+    }
+    return [age_groups, sex_groups, district_groups]
+
+
+def map_outcome_value(outcome):
+    if outcome is None:
+        return UNDETERMINED
+    if outcome:
+        return POSITIVE
+    return NEGATIVE
+
+
+def map_sex_value(sex):
+    if sex:
+        return MALE
+    return FEMALE

apps/exportables/views.py

+from django.http import JsonResponse
+from django.db.models import Max
+from rest_framework import status
+from rest_framework.views import APIView
+
+from apps.cases.models import (
+    CaseSubject,
+    InvestigationCase,
+)
+from apps.exportables.constants import (
+    AGE,
+    DISTRICT,
+    DISTRICTS,
+    FEMALE,
+    MALE,
+    NEGATIVE,
+    POSITIVE,
+    SEX,
+    TOTAL,
+    UNDETERMINED
+)
+from apps.exportables.utils import (
+    generate_initial_counts,
+    generate_initial_group_counts,
+    map_outcome_value,
+    map_sex_value,
+)
+
+
+class CaseCountsView(APIView):
+
+    def get(self, request, format=None):
+
+        case_subjects = CaseSubject.objects.all()
+        investigation_cases = (InvestigationCase.objects
+            .values("case_subject")
+            .annotate(latest_investigation_case=Max("created_at"))
+            .order_by()
+            .values("case_subject__id", "is_positive")
+        )
+
+        outcomes = {}
+
+        for investigation_case in investigation_cases:
+            related_case_subject_id = investigation_case["case_subject__id"]
+            outcomes[related_case_subject_id] = investigation_case["is_positive"]
+
+        age_groups, sex_groups, district_groups = generate_initial_group_counts()
+
+        for case_subject in case_subjects:
+            outcome = outcomes.get(case_subject.id)
+            outcome = map_outcome_value(outcome)
+
+            # Age-based grouping
+            subject_age = str(case_subject.age)
+            if age_groups.get(subject_age) is None:
+                age_groups[subject_age] = generate_initial_counts()
+
+            age_groups[subject_age][outcome] += 1
+            age_groups[subject_age][TOTAL] += 1
+
+            # District-based grouping
+            subject_district = case_subject.district
+            if district_groups.get(subject_district) is None:
+                district_groups[subject_district] = generate_initial_counts()
+
+            district_groups[subject_district][outcome] += 1
+            district_groups[subject_district][TOTAL] += 1
+
+            # Sex-based grouping
+            subject_sex = case_subject.is_male
+            subject_sex = map_sex_value(subject_sex)
+
+            sex_groups[subject_sex][outcome] += 1
+            sex_groups[subject_sex][TOTAL] += 1
+
+        data = {
+            AGE: age_groups,
+            DISTRICT: district_groups,
+            SEX: sex_groups,
+            TOTAL: len(case_subjects),
+        }
+
+        return JsonResponse(data=data, status=status.HTTP_200_OK)

project/settings.py

@@ -52,6 +52,7 @@ INSTALLED_APPS = [
     # Apps
     "apps.accounts",
     "apps.cases",
+    "apps.exportables",
     "apps.logs",
 ]
 

project/urls.py

@@ -10,4 +10,5 @@ urlpatterns = [
     path("logs/", include("apps.logs.urls")),
     path("auth/token/", obtain_auth_token, name="api_token_auth"),
     path("auth/", include("django.contrib.auth.urls")),
+    path("exportables/", include("apps.exportables.urls")),
 ]